Helping the Minoritized Achieve in Academic Science

Archive for May, 2016

Organizing Your Group: Semester Reports

TypingAlthough I have mentioned the semester report in prior posts (management, lab rules, management), I realize that I haven’t made it explicit what the report is for, what it asks for, and how I use it to manage the lab. First, I should say there are lot of ways to do something like this. I started having my students write reports after talking to a very senior WomanOfScience about how she organizes her group. She makes her students write monthly reports. I tried that, but it was too frequent for them and for me. I decided one per semester and one in the summer (3 per year) was a better rate for reporting. I give the students a specific deadline, usually September 1, June 1, and February 1. I also encourage them to take time away from performing new experiments so they can spend time reflecting and writing the report.

Q: Why do this? A: Pedagogy. As most of us are, I am an educator. I noticed that my students were not getting practice with their writing. We would have enough data for a paper, and they would freak out about having to write it. Or, they would write it very poorly. Sometimes they would not include information that they should (data, methods) in the paper because they literally forgot what they did. I decided that the students needed more practice and they needed to routinely recap what they did and their results before it all piled up. I also decided to use this report as a mechanism to help them plan ahead and to do a little self assessment.

Q: What? A: Specific questions. Unlike writing a paper that has a specific format, I wanted the report to be a historical recap of what the students did over the previous semester. I wanted them to think about what their plan had been, what they tried, what worked, what didn’t work, what they accomplished, and give them a place to think about the next 3-4 months. To do this, I ask them to address specific questions in their report. I paste in here the format I use:

  1. A list of goals that the student had for the previous semester/summer;
  2. A description of the experiments the student performed to reach those goals including:
    • The reagents and methods used to perform experiments
    • A description of any analysis you did including the programs you used and the metric you measured and why you measured them
    • A description of the results you found (using words in paragraph form)
    • Figures to illustrate the methods and results you found including images, timeseries of movie data, and plots of quantified data
    • A description of what you think your data means and what the next steps might be
  3. A list of unmet goals;
    • Any problems or issues that the student encountered in attaining those goals
    • Any improvements made or ways that progress can be made faster
  4. A list of goals for the next semester/summer;
    • Is this a reasonable amount of work?
    • What milestones do you expect to meet and when?
  5. A personal statement that addresses the following:
    • What is your personal career goal?
    • How will your work in this lab help you to achieve that goal?
    • What is your personal goal for completing your tenure in this lab? (If you plan to leave the lab eventually – most of you do!)
    • What are your personal goals for achieving your timeline? What skills are needed? What milestones and achievements do you need to make along the way?
  6. A self-evaluation of your progress and work in the lab, what you have done well, and what you need to improve on. For this section, please consider your:
    • Planning and completion of experiments
    • Organization, interpretation and presentation of data (written & oral)
    • Ability to think of “the next logical step” in your experimental design
    • Time management and commitment to research
    • Ability to work independently, troubleshoot & seek outside help when necessary
  7. Any new protocols developed over the last semester, typed, and as separate word documents. The protocols will be posted on the lab website for others to use.

Q: What do you do with these reports? A: Read and comment. I make all the spring reports due June 1, and I get a bunch in all around the same time. Then I have to spend some time reading and commenting. Sometimes I print them out, write comments on the papers, scan for my records, and give the comments back to the student. Other times, I write the comments in a word document and send that to the students. Interestingly, the part that the students are often most hung up on is their self-evaluation. Undergraduate students are especially hard on themselves often saying they are not dedicated enough to the lab. For the more senior students, it is great to see all the experiments they did over the last semester in one place. They often realize how much they did and are proud.

Q: Results? A: Awesome. These reports are super awesome. Here are some reasons why:

  1. The students get a chance to look at what they have done. As I said above, they are often shocked by how much they were able to complete. If they are balancing multiple projects, they are able to look at which projects made progress and which are struggling, and evaluate where to put their efforts.
  2. They get a chance to see what they are going to do. Sometimes students are so excited about taking data, they aren’t thinking about their progress, how much more they really need for a story, or if they might be done. Taking this time to rehash what they did often helps them to sort out where they are and what they still need to do.
  3. They get a chance to self-evaluate. Similar to giving them time to plan, giving time to self-evaluate is really important to stay motivated and keep things moving.
  4. Sometimes we realize they have enough for a paper. This has happened 3 times, in fact. I’m not sure how your science works, but in my field, it often takes a year to figure out how to take the data, but once you figure it out, you can basically take all the data in a couple months. Three different times, when I read a student’s report, there was enough data in there for a paper. Maybe a few new experiments were needed. Maybe a re-analysis, but the meat of a paper was there. Isn’t that amazing?

The only downside of this process is that sometimes I am too busy to do a good job reading the reports. That is bad, and I need to make time to do it. I am going to get many of them on June 1, and I need to make time to read and respond to them. It is especially important during my current situation (sabbatical) that I take the time to read and respond to all the reports.

What are your thoughts? Post or comment here. Push the +Follow button to get an email every time I post!

 

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Organizing Your Group: Group Meetings

WomenTrainingAs I was writing the post about how best to meet with your advisor, I kept looking through my own blog for advice on how to conduct group meetings. I couldn’t find a post just on that topic. How is that possible? How could I have missed such an important topic? Is the problem that the solutions are too varied? Or the topic is too broad? Perhaps. But it is more likely that it was just too damn obvious. I mean, I had all kinds of posts about novel ways to organize your research group including: StateOfTheLabAddress, TrainingStudents, LabRules, but nothing on actually having a group meeting. And almost every research group has some kind of group meeting sometimes, so maybe I just thought it didn’t need saying.

Well, I think it does, so here I go. Actually, I am going to have a series of posts on this topic, similar to what I did about advice on when to have a baby. That is because I don’t think there is a single right answer. Different groups have different personalities and need to do different things. I have asked some awesome WomenOfScience to send me some of their group meeting advice, and they did! I will start off with what *I* do, and then I will have some posts about what others do. That way, if you see something new you like to do, you can try it. Also, I would be interested in follow-up posts. If you changed your meeting style, what was the outcome? Was it good, bad, ugly?

Types of group meetings: First off, there are lots of ways to meet with your group. I think when people discuss group meetings, they think of weekly meetings where one person of the group speaks about their work over the last couple months and gives a synopsis. We definitely have weekly group meetings, although I have a different style (see below). But, we also have broader, bigger group meetings with multiple groups and journal clubs. In the summers, we offer coordinated “classes” or lectures on special topics. Below, I describe these different types of meetings we have in our group and share how I personally conduct my group meetings and other such meetings. There is no one right way to do this! This is just one example that works for me.

Weekly group meetings: In my lab, I like to have every person present every week to update everyone else in the lab on what they are doing. This keeps me and others in the loop. I also encourage others to comment and make suggestions, so the team and benefit through our various backgrounds and knowledge bases.

To do this, I have a specific format for the presentations, so it doesn’t get crazy and unruly. First, everyone is limited to ONE SLIDE each. On that slide they must have 1. What they they last week, 2. What they plan to do next week, and 3. An image, picture, plot, movie that represents what they did the previous week. I try to get the slides in advance and put them all into a single presentation file that we can go through quickly. I often fall down on this part of the job and miss one or haven’t loaded them all by the start of the meeting, which is definitely not good meeting organization, but it does give us time to chat and talk about other issues in the lab. Group meetings are also a time to organize one-on-one meetings and discuss general group business.

If a student does not have their slide, there is a mild consequence – they must get up and present their slide as a chalk talk and perform a silly dance. Many students are embarrassed and do not forget their slide again. Some students do not find this to be a deterrent to forgetting their slide, which is a problem. There is a solution: I was chatting with another professor who also uses this style of lab meeting (including the  consequence), but his negative feedback is to have the student do burpees – those jump up push up things from gym class that NO ONE likes. Apparently, this is far more motivating than the dancing.

Journal clubs: During the school year, we have a weekly journal club, usually in conjunction with another lab. Some of my students are required by their graduate program to attend a weekly journal club for credit, so this fulfills that requirement. In our journal club, one person is in charge of picking the paper and distributing it. But, that person is NOT solely responsible for the content of the presentation. Instead, that person makes the slides of each figure, and we cycle through different people who present each figure. This format ensures that others have read the paper (at least enough to present their individual figure). This makes the discussion far better, since more people are prepared. I have seen a number of helpful instructions on how best to present a paper. It is very helpful to give these instructions at the beginning of the semester!

Larger/collaborator group meetings: We are apart of larger groups of researchers that collaborate or just work on related topics and want to get together to present their work and discuss and share issues and ideas. In these meetings, we rotate which group/student presents their work to the entire group in a one-hour format. Many times, we connect with collaborators via skype, which can be difficult. These meetings good for students to get practice with longer-format presentations.

Pedagogical group meetings: In the summers, we often have extra meetings that are basically lectures like one might have in a class. This is to help people learn a little more deeply about a specific topic of interest to the lab. Last year, we went through a book, chapter-by-chapter, and took turns presenting/lecturing on the chapters to each other. This year, I have a couple postdocs who want to teach some basics of some of the techniques we use in the lab. In past years, I have added time onto our weekly group meetings to go over professional development such as drafting a CV or guidelines on applying for fellowships or other things. Since the students organize and ask for these types of things, I think they must enjoy and get something from them.

So, what do you do? Post here in the comments, and I will use them for future posts on this topic. I know there are a myriad ways to have a group meeting – let’s hear yours! To get an email every time I post, push the +Follow button. If you haven’t been getting updates, WordPress might have lost you (sorry). Please feel free to follow again!

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How to Meet with your Advisor

Conference_de_londresSo, I’m on sabbatical. OK, you know. And, I’ve been having meetings with students over SkyFaceGoogleHangoutTimepe. And, I have to say that, while it is frustrating to be 3000 miles away from the lab which has definitely led to some problems, in general, my individual meetings with students have gotten… better. We have every-other-weekly individual one-on-one meetings, and the students are coming more prepared and more focused than they ever did when I was there in person (exceptions abound, of course). I can speculate all day about the reasons this may be happening, but the fact that it is happening has exposed some best-practices for having meetings with your advisor. I will describe those best practices here, but before I do, I would like to point to a couple posts of related interest including: Effective Meetings, StateOfLab, mentoring.

Bring your notebook: I can’t tell you the number of times I am meeting with a student and I ask a question about their work, results, protocol, and they say, I can’t remember. My response is: no shit. OK, not really. I say that in my head. See, that isn’t surprising because you aren’t supposed to remember everything. That is what a lab notebook is for. The beauty of having a lab notebook is that you don’t need to remember. Indeed, relying on your memory will get you in huge, huge trouble, because our memories are faulty, not everything makes it into long-term memory, and you can only remember about 7 things in your short-term. When the student says they can’t remember, I usually ask if they wrote it in their notebook. That elicits a response of, “oh yeah!” At this point, it is prudent to go get your notebook, but this whole time-sucking activity can be avoided if the student would just bring their notebook to every meeting. So, always bring your notebook to the meeting.

Bring your data: In addition to your notebook, it is best to bring your data with you. Most data nowadays is electronic, so that means bringing your laptop and hard drive. Many labs have some sort of intranet or server to share data. If you upload your data to that well-before the meeting, it will be uploaded and can be downloaded in a timely manner. You may have a lot of data, so you might need to pre-sort. Don’t spend time at the meeting clicking open random files to find the right one. You should have noted before hand in your notebook interesting and remarkable data sets. Also, make sure you have characteristic data sets. It always happens that some look “better” than others, but you should also show the “quintessential” data set. Maybe you are past the raw data part, but there will still be things to show. Show your analysis method. Show your analyzed data. Describe how you calculated the error bars. If the data is a distribution, is it Gaussian? What functional form does the data fit to? Is that reasonable? What is the goodness of fit? Your advisor should not only know how you did this, they should want to know. If you make a mistake, they can catch it early and help you correct it. That is always preferable to finding out after submitting the paper, accepting the paper, or publishing the paper!

Be prepared: Bringing your notebook and data are a part of being prepared for your meeting. But, they are not the only way to be prepared. You should have an idea of what you want to talk about. Do you want to show off your amazing data? Do you have a question about how to analyze your data? Are you worried that a recent experiment isn’t replicating the first couple of experiments properly? Have a list of topics and questions you need to address with your advisor. And make sure you understand how you got the data you are showing. All the questions I describe about data above are things you should be prepared to discuss. Again, you do not need to memorize these things, but be able to quickly locate them in your notebook or within your computer.

Take notes: I can’t tell you how many times I have been talking to a student and giving the most brilliant, insightful information about their work, and then I say, “You got that?” And they look at me, with no pen in hand, no notebook open, no ability to write or recall the rainbows of knowledge I just spewed from my brain. Actually, many times, I diagram things on the white board when I am talking. In a sense, I am taking notes – or making notes, but these are written from my perspective. It is far better if the student takes their own notes. We can always take a picture of the board, and you can paste it in your notebook, but my hieroglyphics might not make sense next week or next month. Best to take your own notes and paste the board in under.

Actively listen – restate and seek confirmation: For any conversation where you want to make sure that all parties are understanding, it is always best to use active listening. This is where you basically double check that you are on the same page. You should restate their ideas or instructions in your own words, and seek confirmation  for what you understand to be the sentiments of the other parties. This is important to do in any conversation, but especially one where instructions are being given or you truly need to ensure that you do the right thing.

Prioritize: Before you leave the meeting, it is best that you prioritize your plan of action and double check that is the right priority for your advisor, too. All too often, a student leaves the office with a long list of action items, but no priority on how to attack them. Best to check the priority before you leave to make sure you are working on the right thing first on the list.

When working from a distance, I have found that, in addition to the things described above, a few extra things are needed.

Send protocols: Because I cannot look at your notebook, I need some information on how you did your assay. I have found with several students over the past semester that I thought I was helping to troubleshoot why their experiments weren’t working. They told me, verbally, what they were doing, but I couldn’t see the notebook or what they were actually doing. The advice I gave them turned out to not help at all. After a couple weeks, and several failed attempts to fix things, I realized that I needed more information on what they were doing. Turns out, the affirmative statements they made when I asked how they were doing their experiments were not the whole story. What I was really lacking was the protocol of how they were doing their experiments. Luckily, all the students were actually taking good notes and using printed protocols. (There is no helping someone who doesn’t write anything down!) Once I got the protocol, I realized why all my advice wasn’t working. The protocols were completely effed. Much of this was either a new protocol or a specific variation of a worked out protocol that drifted way out of the bounds of reasonable. Most of the time, the student was doing something that was fundamentally “unstable” such as pipetting 0.2 ul or something equally prone to uncertainty.

Send slides: Because I cannot look at all your data, it is best when students send a powerpoint with representative data and analyzed data. Most of my students have gotten used to this, because I usually have weekly group meetings where everyone presents every week and they have to have one slide each (meetings, meetings). Unfortunately, sometimes this means they only send me one slide, but it is better than no slides.

Share your screen: Another way to effective communicate and share data and knowledge is to share your screen with your student. I have done this several times, especially when showing a student a new data analysis. But, the students can also do that with me to share data. When doing this, the same rules as above for bringing and pre-selecting the data need to be done. A word of caution – when using GoogleHangouts, you must pick the application, and you can only share that application – it is annoying. Skype is better at this.

Let me re-iterate: Take Notes! Actively listen! It is so much more important for the student to take notes and to check what you heard when the advisor is a little head on a screen. Once, during my sabbatical, I was talking to a student. As I was vomiting pearls of wisdom, the student looked up and said, “Wait! I need my notebook to take notes!” The student ran out of the room to grab the notebook, and began scribbling furiously upon returning. Of course, I didn’t say anything about the notebook, because I had no idea that the notebook wasn’t there. I could tell that notes weren’t being taken, but it didn’t occur to me to say anything. Since that time, this student has never forgotten their notebook again at an online meeting. A lot of the follow-up I have been doing has been taking pictures of my notebook where I took notes and sending that. Often those notes are multi-colored and with illustrations.

So, this is what I have come up with. But, I am sure I am missing something. If so, post here with a comment!! Push the +Follow button to get an email every time I post.

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